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Systematics/Phylogenetic Software

General Websites
    http://taxonomy.zoology.gla.ac.uk/software.html
    http://evolution.genetics.washington.edu/phylip/software.html
    http://www.plantbiology.siu.edu/faculty/nickrent/SystematicsLinks.html

Phylogenetic Inference
    T.N.T.
    PAUP
    PHYLIP
    MrBayes

Sequence Alignment
    Align
    Clustal
    KAlign
    MAFFT
    MUSCLE
    T-Coffee

Biogeography
Digital Taxonomy – Biogeography and GIS
     University of Oregon Geography Dept.

Character Evolution/Tree Manipulation
    MacClade
    Mesquite
    Treeview
    WinClada 

Specimen Databasing
    Biota
    Mantis
    Mandala
    Specify

Digital Keys
    3I  
    Delta/IntKey
    Discover Life
    LUCID

   

 

 
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